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Assessment of subchondral bone marrow lesions in knee osteoarthritis by MRI: a comparison of fluid sensitive and contrast enhanced sequences



Bone marrow lesions (BMLs) in knee osteoarthritis (OA) can be assessed using fluid sensitive and contrast enhanced sequences. The association between BMLs and symptoms has been investigated in several studies but only using fluid sensitive sequences. Our aims were to assess BMLs by contrast enhanced MRI sequences in comparison with a fluid sensitive STIR sequence using two different segmentation methods and to analyze the association between the MR findings and disability and pain.


Twenty-two patients (mean age 61 years, range 41–79 years) with medial femoro-tibial knee OA obtained MRI and filled out a WOMAC questionnaire at baseline and follow-up (median interval of 334 days). STIR, dynamic contrast enhanced-MRI (DCE-MRI) and fat saturated T1 post-contrast (T1 CE FS) MRI sequences were obtained. All STIR and T1 CE FS sequences were assessed independently by two readers for STIR-BMLs and contrast enhancing areas of BMLs (CEA-BMLs) using manual segmentation and computer assisted segmentation, and the measurements were compared. DCE-MRIs were assessed for the relative distribution of voxels with an inflammatory enhancement pattern, Nvoxel, in the bone marrow. All findings were compared to WOMAC scores, including pain and overall symptoms, and changes from baseline to follow-up were analyzed.


The average volume of CEA-BML was smaller than the STIR-BML volume by manual segmentation. The opposite was found for computer assisted segmentation where the average CEA-BML volume was larger than the STIR-BML volume. The contradictory finding by computer assisted segmentation was partly caused by a number of outliers with an apparent generally increased signal intensity in the anterior parts of the femoral condyle and tibial plateau causing an overestimation of the CEA-BML volume.

Both CEA-BML, STIR-BML and Nvoxel were significantly correlated with symptoms and to a similar degree. A significant reduction in total WOMAC score was seen at follow-up, but no significant changes were observed for either CEA-BML, STIR-BML or Nvoxel.


Neither the degree nor the volume of contrast enhancement in BMLs seems to add any clinical information compared to BMLs visualized by fluid sensitive sequences. Manual segmentation may be needed to obtain valid CEA-BML measurements.

Peer Review reports


Pain associated with osteoarthritis (OA) of the knee is one of the main causes for disability in ageing Western populations [1, 2]. Although intensively studied, the pathophysiology and pain-causing mechanism in knee OA are generally unknown [3]. Recent literature evidence has shown that bone marrow lesions (BMLs), a non-specific but common feature in knee OA, may or may not be associated with pain [46]. There is also limited and conflicting evidence on pain severity being correlated to BML size or not [79].

BMLs are defined as poorly delineated areas of increased signal intensity directly adjacent to the subchondral bone in the normally fatty epiphyseal marrow on fat-suppressed T2-weighted and contrast enhanced T1-weighted images [10, 11]. On non-contrast MRI, BMLs are optimally evaluated using fluid-sensitive fat-suppressed sequences [12]. Histopathologically, BMLs represent a mixture of bone marrow edema, necrosis and fibrosis, microfractures with bleeding in different stages of healing, and remodeled trabeculae as well as fibrovascular ingrowth [1315]. The increased vascularity explains why areas with BMLs show enhancement on static contrast enhanced (CE) T1-weighted images, preferably with fat saturation (T1 CE FS) [11, 16, 17], and dynamic CE MRI (DCE-MRI) sequences [1820]. The volumetric proportion of detectable enhancement in knee OA using T1 CE FS has been reported to constitute 62% of the BML volume using proton density (PD) weighted FS sequences [11]. Comparison with DCE-MRI of BMLs has to our knowledge not been performed, although knee OA has been investigated with regard to synovial changes using DCE-MRI [2123]. The diagnostic value of T1 CE FS and DCE-MRI compared to a STIR sequence only needs to be investigated in relation to BMLs. The same applies to a possible relation between contrast enhancing areas of BMLs (CEA-BMLs) and OA symptoms.

The aims of our study were to assess BMLs by contrast enhanced MRI sequences compared to MRI using STIR images and to analyze the association between these findings and disability and pain.



The patients were recruited from a previous randomized placebo-controlled trial involving 337 patients with knee OA according to the ACR (American College of Rheumatology) criteria [24] comparing five intra-articular injections of Hyalgan® and placebo, respectively [25]. Twenty-two patients with knee OA affecting the medial femoro-tibial articulation were randomly selected among 83 participants obtaining MRI at both baseline and follow-up. A list of these participants was sorted according to the day of birth, and the first 22 patients were chosen. Participants gave written informed consent prior to being enrolled in the study, including consent to publish study results and images [26]. The study was approved by the Central Denmark Region Committee on Biomedical and Research Ethics.

Patients filled out the Western Ontario and McMaster Universities Index (WOMAC) questionnaire at baseline and follow-up [27]. The WOMAC items, pain (5 items), stiffness (2 items) and physical function (17 items), were each scored using a 100 mm Visual Analogue scale with the following ranges: pain = 0–500, stiffness = 0–200, physical function = 0–1700, total score = 0–2400.


Radiography: Routine radiographic examination consisting of standing weight-bearing postero-anterior and lateral views with the knee in 30° flexion [28] were obtained in all patients at baseline.

MRI consisted of the following sequences: Sagittal STIR and sagittal and axial T1-weighted sequences before contrast. Following intravenous administration of Gadolinium contrast (Gd-DTPA, 0.2 mmol/ml, GE Healthcare AS, Oslo, Norway) using 0.1 mmol/kg with a maximum of 10 mmol DCE-MRI was obtained using a sagittal T1-weighted spoiled gradient echo sequence with four sagittal slices every 5 s with 50–65 repetitions, repetition time (TR) = 50.2 ms, echo time (TE) = 4.1 ms, field of view (FOV) = 16 cm, slice thickness (ST) = 4 mm, matrix = 128 × 128, flip angle 30° and acquisition time (AT) 4.2–5.4min. Finally, sagittal and axial T1 FS post-contrast sequences were performed using the following parameters: TR = 860 ms, TE = 20 ms, FOV = 16 cm, ST = 4.0 mm, interslice gap (IG) = 0.8 mm, matrix = 512 × 512, total AT 7.2min. DCE-MRIs were missing in 6 of 44 examinations for technical reasons and follow-up analyses could therefore not be performed in 5 patients.

Details of the MRI protocol are described in an additional file (see Additional file 1).

Image analysis

All images were anonymized and separated before analysis. The radiographic changes were graded according to Ahlbäck [29] by an experienced musculoskeletal radiologist (NE) [30].

All MR sequences were assessed twice by a radiological registrar (FKN) with at least a 4-week interval between the assessments; all sequences except DCE-MRI were also assessed by NE. The assessments were preceded by training sessions amongst FKN, NE and AGJ of 15 examinations not included in the present study.

According to the definition of BMLs [10, 11] only changes directly adjacent to the subchondral bone were recorded and sections and areas of sections containing both bone marrow and extra-osseous soft tissue such as synovia were strictly excluded. Consequently, only three to four slices of the medial femoral condyle and tibial plateau remained for analyses. When four slices were available, the most medially located three slices were used for BML segmentation.

Images were analyzed for CEA-BMLs and STIR-BMLs by manual segmentation (MS) and computer assisted segmentation (CAS), respectively. Both methods have been tested on STIR images as described in a previous study [31] and all results of segmentation on STIR images have been presented in this publication. For a detailed method description of MS and CAS, please see Additional file 1.

DCE-MRI measurements were performed using Dynamika (DYNAMIKA software, version 3.2.6 (, Leeds, UK)), a software performing a voxel-by-voxel-based line fit analysis to calculate parametric maps.

One region of interest (ROI), outlined similar to CAS and MS (according to Hunter et al. [32]) (Fig. 1), was drawn in the medial femoral condyle and tibial plateau, respectively, to obtain quantitative data. Time intensity curves (TICs) expressing the enhancement pattern of each voxel were classified as one of four color-coded models for gadolinium uptake: (i) no enhancement; (ii) persistent enhancement; (iii) plateau (baseline → uptake → plateau); (iv) wash-out (baseline → uptake {→ plateau}→ wash-out) [23]. The volume of voxels with the pattern of ‘plateau’ and ‘wash-out’ enhancement were pooled to a value Nvoxel and used as a measure of the volume of inflammation [22, 23]. The initial rate of enhancement (IRE) and maximal enhancement (ME) in the segmented area were also recorded to obtain the heuristic DCE variables IRExNvoxel and MExNvoxel [23]. Due to the applied method, no reference value was needed for calculating TICs.

Fig. 1

a Sagittal STIR (left), post-contrast T1 FS (T1 CE FS) (middle) and dynamic contrast enhanced MR images (DCE-MRI) (right) in one patient through the medial joint compartment with region of interests (ROIs) drawn in the weight-bearing femoral condyles. Computer assisted segmentation of BML on the STIR and T1 CE FS images is shown; the marked pixels represent areas above the threshold signal intensity, i.e., STIR-BML and CEA-BML, respectively. An area with rapid and steep enhancement (right image) is seen in the femoral condyle, yellow color. Pixels exhibiting a pathologic enhancement pattern within the ROI are visualized and segmented digitally. b Corresponding STIR (left) and T1 CE FS images (right) without ROI or pixel segmentation. (BML=bone marrow lesion, CEA-BML=contrast enhancing areas of bone marrow lesion)

Statistical analysis

Data was analyzed using Analyse-it software (Analyse-it for Microsoft Excel (version 2.20) Ltd.; 2009). CEA-BML and STIR-BML were compared in all the 44 examined knees by Bland-Altman analyses, using plots, bias and confidence intervals (CIs) [33] and descriptively using median and quartiles after adjusting for the difference in inter-slice gap.

The inter- and intra-observer reliability were assessed based on all knee examinations irrespective of baseline or follow-up status by Bland-Altman analyses, using plots, bias and confidence intervals (CIs).

The WOMAC scores were analyzed descriptively using medians and ranges. The Spearman rho test was used to determine correlation coefficients between WOMAC scores and CEA-BML, STIR-BML and Nvoxel parameters, respectively. Wilcoxon’s signed ranked test was used to compare median values between baseline and follow-up. The Spearman rho test and Wilcoxon’s signed ranked test were also performed after the segmentations of the femoral condyle and tibial plateau had been merged into one total knee score to express the total CEA-BML, STIR-BML and Nvoxel involvement, respectively. A p value <0.05 was considered significant.


Patient characteristics are shown in Table 1.

Table 1 Baseline data of the patients

Inter- and intra-observer agreement for T1 CE FS and STIR as well as intra-observer agreement for DCE-MRI was high with small bias values (Table 2). Thus, the mean values of CEA-BML and STIR-BML measurements of the two assessors were subsequently used.

Table 2 Observer agreement for relative and absolute CEA-BML and STIR-BML measurements, and relative Nvoxel, irrespective of baseline/follow-up

STIR-BMLs by MS and CAS and CEA-BMLs by MS according to the definition were not found in 13 femoral condyles and 15 tibial plateaus. Four of these femoral condyles and six tibial plateaus demonstrated CEA-BMLs by the CAS segmentation (Fig. 2). Voxels indicating inflammation by DCE-MRI were not seen in 5/38 femoral condyles and 5/38 tibial plateaus; STIR-BMLs by MS and CAS and CEA-BMLs by MS were not found in these examinations either, but CEA-BMLs by the CAS segmentation were seen in one femoral condyle and two tibial plateaus.

Fig. 2

a Sagittal STIR and b T1 CE FS images through the medial condyle in a patient without STIR-BML or CEA-BML using MS. The marked pixels represent areas above the threshold signal intensity. a Random clusters of pixels are marked. The segmented area was 9 mm2 or 1.1%. b A large number of marked pixels are seen in the anterior part of the condyle. The segmented area was 280 mm2 or 33%

The average CEA-BML volumes using MS were smaller than the measured STIR-BML volumes with a negative bias of 3.2–3.5% for CEA-BML measurements compared to STIR-BML measurements (Table 3). However, the measured CEA-BML volumes were 4.1–5.3% larger than the STIR-BML volume using CAS (Table 3).

Table 3 Comparison of CEA-BML and STIR-BML measurements of all 44 examinations, relative and absolute values

The positive difference between CEA-BML and STIR-BML measurements using CAS (Table 4) was due to a small but general trend, as well as a number of outliers in the Bland-Altman plots. The 95% limits of agreement were exceeded in five CAS analyses of the femoral condyles (>3070 mm3) and in three analyses of the tibial plateaus. Four of the femoral condyle outliers were observed in two patients (baseline and follow-up); in one outlier patient, the high values were observed in both the femoral condyle and tibial plateau at follow-up. The remaining tibial outliers were observed in two different patients at baseline.

Table 4 Comparison of CEA-BML and STIR-BML volume in all 44 examinations, absolute values

The outliers were analyzed in a consensus reading between NE and FKN and revealed an apparent increase in signal intensity in a superficial rim of the medial and lateral femoral condyles (Figs. 2 and 3) and, to a smaller extent, the tibial plateaus. Exclusion of the outliers narrowed the variation (Table 4) and they were not included in the analyses regarding association with disability and pain, nor with changes during follow-up.

Fig. 3

Trans-axial post-contrast T1 FS MR images of the femoral condyles. Two identical images without (a) and with (b) calculations of Gray (GY), performed in Impax. The difference in signal intensity is barely visible in image (a) between the medial and central (lateral) part of the medial femoral condyle. Yet, there is a difference in GY between the areas of 151.1 GY, meaning the average GY in the central portion is ~ 21% lower than in the medial portion. Also note the blood vessels perforating the condyles from the periphery

Analyses of DCE-MRI revealed a median relative/absolute Nvoxel distribution for all examinations of 27.4% (range 0.0–93.2%)/284 mm2 (range 0–1077 mm2) and 24.0% (range 0.0–94.8%)/218 mm2 (range 0–786 mm2) in the femoral condyles and tibial plateaus, respectively. Since DCE-MRI measurements were confined to one slice, the results were not directly compared to the data from the static MR sequences.

Clinical and radiological correlation

A significant correlation was seen between the total volume of CEA-BML and STIR-BML in the medial joint compartment and WOMACpain and WOMACtotal scores using MS and CAS (Table 5). Both WOMACpain and WOMACtotal scores were significantly correlated with Nvoxel and MExNvoxel, but not with IRExNvoxel. The ME value showed very little variation (femur: median 1.11, range 1.04–1.56; tibia: median 1.07, range 1.03–1.48) in the 33 examinations with postitive Nvoxel findings and the addition of this value did not seem to add any significant information. The corresponding IRE values were very small (femur: median 0.001, range 0.000–0.006; tibia: median 0.001, range 0.000–0.005) and they only seemed to distort the correlations (Table 5).

Table 5 Comparison of WOMAC scores with CEA-BML, STIR-BML and Nvoxel–parameters

There was a significant reduction in total WOMAC score of 286 (p ≤ 0.023) from baseline to follow-up. No other significant changes were observed (Table 6).

Table 6 Median differences in change of WOMAC scores and imaging parameters from baseline to follow-up


Our study showed that the measured volume of CEA-BMLs on average were smaller than the measured STIR-BML volumes using MS, but CAS measurements of CEA-BMLs were not consistently reliable due to signal disturbances in some of the T1 CE FS sequences. There was a positive correlation between CEA-BML/STIR-BML size and pain but no significant correlation between change in CEA-BML/STIR-BML and WOMACpain during follow-up.

Contrast enhanced MRI is not routinely used in OA studies, and the enhancement characteristics have only been evaluated in a few studies [11, 16, 17]. These studies have focused on size measurements of BMLs, comparing fluid sensitive sequences, i.e., PD FS or STIR, with contrast enhanced T1 FS series; only one study [11] has, however, focused specifically on OA related BMLs. In this study the pathological areas on T1 CE FS were generally smaller than BML-areas on PD FS [11]. In the studies by Schmid et al. and Mayerhoefer et al., only a minor number of patients had “bone marrow edema” due to OA (3.5and 26.7%, respectively), other reasons being osteonecrosis, bone bruise and osteochondral lesions [16, 17]. Schmid et al. found that the volume of bone marrow edema was slightly larger by STIR, whereas Mayerhoefer et al. found that the volume was largest on T1 CE FS using a gadopentate dose of 0.1 mmol/kg but slightly smaller on T1 CE FS than on STIR using a gadopentate dose of 0.075 mmol/kg [16, 17].

In line with the study by Roemer et al. [11], we found that the CEA-BML volume by T1 CE FS generally was smaller than the BML volume by STIR using MS. We did, however, find CAS to be unreliable on T1 CE FS sequences in some cases where areas of increased signal intensity were seen in the peripheral parts of the femoral condyles and tibial plateaus (Fig. 2). These signal disturbances could be due to the anatomical composition of the knee (Fig. 3), non-uniform fat saturation, magnetic field inhomogeneity, receive coil inhomogeneity or a combination hereof. Since our threshold calculation was performed using the most central slices in the lateral femoral condyle and tibial plateau, the signal disturbances did not affect the threshold calculation.

We found a positive correlation between CEA-BML/STIR-BML volume and symptoms and also between Nvoxel and MExNvoxel and symptoms. However, there was no indication that CEA-BMLs or the dynamic parameters Nvoxel or MExNvoxel were better correlated with pain than STIR-BMLs. Thus, the results cannot support that changes in vascularization in BMLs play a role in the symptomatology of BML. Therefore, the use of contrast agents for visualization of BMLs in OA seems unnecessary in clinical practice.

The median scores for pain decreased during follow-up but it was not accompanied by a corresponding decrease of BMLs by MRI. This indicates that other knee joint changes are of importance. Consistent with this, other factors have been reported to be associated with OA symptoms [5, 23].

Our study has a number of limitations, especially the small number of participants. We only analyzed subchondral bone marrow changes and did not look for other pathologies known to be correlated with pain, e.g., synovitis or meniscal damage [23]. There could be anatomical and technical reasons for the occurrence of altered signal intensity by CEA-BML, which was not analyzed further. In our material, this was evident both as a small general trend and in a minor number of considerable outliers on the T1 CE FS-sequences, underlining both the need for high quality images and the fact that images cannot solely be analyzed by computer software.

The strength of our study is the use of an exact definition of the slices and areas used for segmentation. By excluding sections with partial volume artifacts from the surrounding soft tissue, our data was not distorted by signal intensity changes from the synovia and/or joint fluid. We have not found similar restrictions of ROI definitions in other OA analyses of BMLs [10, 32, 3436]. In the illustrations of the scoring system proposed by the Canadian CareArthritis [36], areas affected by partial volume from synovitis seems to be included in the registration of BMLs.


In conclusion, we found that contrast enhancing areas of BMLs on average were smaller than STIR-BMLs although the differences were small and that manual segmentation may be needed to obtain valid CEA-BML volumes. The CAS method proved suitable for BML segmentation on fluid sensitive sequences being quickly performed and reproducible. Both CEA-BMLs and STIR-BMLs were similarly correlated to symptoms. The volume of voxels indicating inflammation by the DCE-MRI sequence were equally correlated to symptoms.



Bone marrow lesion


Computer assisted segmentation


Contrast enhanced


Contrast enhancing area of bone marrow lesion


Confidence interval


Dynamic contrast enhanced-MRI


Initial rate of enhancement


Maximum enhancement


Manual segmentation




Proton density


Region of interest


Time intensity curve


Western Ontario and McMaster Universities Index


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We thank all study participants and Kristian Stengaard-Pedersen for collecting patient material.


The study was financially supported by A.P. Møller og Hustru Chastine Mc-Kinney Møllers Fond til Almene Formal by donation of the MR equipment.

Availability of data and materials

The datasets supporting the conclusions are included in the manuscript. Please contact the corresponding author if you wish to access the material in more details.

Authors’ contributions

FKN, NE and AGJ were all involved in the design and coordination of the study, including data collection and measurement as well as the manuscript preparation. AJ selected the patients and collected clinical data. DP developed the software for computer assisted segmentation and was involved in the analysis and interpretation of the data. All authors meet the requirements for authorship including final approval of the manuscript submitted.

Authors’ information

FKN: Department of Radiology, Aarhus University Hospital, Noerrebrogade 44, 8000, Aarhus, Denmark: PhD student within MRI of knee disorders including osteoarthritis.

NE: Musculoskeletal radiologist, DMSc and Professor. Department of Radiology, Aarhus University Hospital, Noerrebrogade 44, 8000, Aarhus, Denmark.

AJ: Rheumatologist, PhD, Department of Rheumatology, Aarhus University Hospital, Noerrebrogade 44, 8000, Aarhus, Denmark.

DP: Medical Engineer, PhD, Department of Biomedical Engineering, Aarhus University Hospital, Noerrebrogade 44, 8000, Aarhus, Denmark.

AGJ: Musculoskeletal radiologist, DMSc and Professor. Department of Radiology, Aarhus University Hospital, Noerrebrogade 44, 8000, Aarhus, Denmark.

Competing interests

The authors declare that they have no competing interests.

Consent for publication

Not applicable.

Ethics approval and consent to participate

The study was approved by the Central Denmark Region Committee on Biomedical and Research Ethics. Prior to enrolment in the study, all participants gave signed informed consent after receiving written and oral information, including consent to publish study results and images.

Author information



Corresponding author

Correspondence to Flemming K. Nielsen.

Additional file

Additional file 1:

Supplementary imaging protocol, method description and figures. (ZIP 5644 kb)

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Nielsen, F.K., Egund, N., Jørgensen, A. et al. Assessment of subchondral bone marrow lesions in knee osteoarthritis by MRI: a comparison of fluid sensitive and contrast enhanced sequences. BMC Musculoskelet Disord 17, 479 (2016).

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  • Magnetic resonance imaging
  • Knee osteoarthritis
  • Bone marrow lesion