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Table 1 Primer sequences used for relative real-time RT-PCR

From: Activation of intervertebral disc cells by co-culture with notochordal cells, conditioned medium and hypoxia

Gene

Accession number

Forward (5′-3′)

Reverse (5′-3′)

bovine (Bos taurus)

Bt_r18S

DQ222453.1

ACG GAC AGG ATT GAC AGA TTG

CCA GAG TCT CGT TCG TTA TCG

Bt_ACAN

NM_173981.2

GGC ATC GTG TTC CAT TAC AG

ACT CGT CCT TGT CTC CAT AG

Bt_CD24

NC_007300.4

AGA CTT ACT CAA ATC AAA

AAC AGT AGA GAT GTA GAA

Bt_col1 A2

NM_174520.2

GCC TCG CTC ACC AAC TTC

AGT AAC CAC TGC TCC ATT CTG

Bt_col2 A1*

AY743675.1

CGG GTG AAC GTG GAG AGA CA

GTC CAG GGT TGC CAT TGG AG

porcine (Sus scrofa domestica)

Ssd_r18S

NR_046261.1

TAG AAG GAA GAG GAA CCA T

TAA TGT CCA ACT CAC TGA AG

Ssd_ACAN

NM_001164652.1

CAG TAA CTT CGT GCC TAG

GGT CCT CTA TCT CCA GTT

Ssd_T (brachyury)*

NC_010443.4

TCA CCA ACA AG CTCA ATG

CTC TCA CGA TGT GGA TTC

Ssd_col1 A2

AB237775.1

TAT CGG AAT TAA CCA GAC A

ACA GGA TTG ACA GAT TGA

  1. *Denotes primer match for both species.
  2. The PCR was run in a two-step protocol; 45 cycles with a 2-step protocol and an annealing temperature at 57°C.