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Table 3 Cartilage matrix proteins and modifying enzymes upregulated in neonatal cartilage relative to adult cartilage

From: Differential gene expression associated with postnatal equine articular cartilage maturation

Gene Name

Gene Symbol

GenBank ID(s)

Fold Change (N/A)

p-value

Procollagen, type II alpha 1

COL2A1

CX594994.1

2.77

0.0161

  

CX595082.1

2.31

0.0454

  

CX595094.1

7.86

0.0037

  

CX596509.1

3.74

0.0059

  

CX597852.1

2.62

0.0503

  

CX599228.1

2.70

0.0557

  

CX599236.1

2.68

0.0402

  

CX600104.1

2.64

0.0546

  

CX601257.1

3.43

0.0192

  

CX602198.1

2.72

0.0488

  

CX603857.1

2.43

0.0758

  

CX604122.1

2.93

0.0246

  

CX604856.1

2.19

0.0310

  

CX605192.1

1.75

0.0055

  

CX605350.1

2.68

0.0447

  

CX605856.1

8.10

0.0040

Procollagen, type IX

COL9A1

CX602049.1

4.61

0.0029

  

CX605273.1

6.70

0.0108

 

COL9A2

CX597674.1

2.11

0.0304

 

COL9A3

CX594271.1

1.93

0.0083

  

CX603177.1

1.41

0.0889

Lysyl oxidase-like 2

LOXL2

CX600483.1

2.98

0.0051

  

CX598127.1

2.52

0.0033

Nidogen-2

NID2

CX596324.1

2.71

0.0003

  

CX600869.1

2.31

0.0037

Proline 4-hydroxylase, alpha 1

P4HA1

CX605971.1

2.38

< 0.0001

  

CX592418.1

2.23

< 0.0001

Tenascin-C

TNC

CX593372.1

4.81

0.0043

  

CX601743.1

2.74

0.0430

  

CX601953.1

2.25

0.0715

  

CX603922.1

3.09

0.0062

  

CX604542.1

2.39

0.0016

  

CX605854.1

4.72

0.0054

  1. Gene Name & Gene Symbol: gene identity of best BLAST match homologue to cDNA or plasmid; GenBank ID: Accession number of equine cDNA spotted on the microarray; Fold Change (N/A): Relative Neonate/Adult fold change; p-value: one-sample t-test p-value for probe across the four biological replicates in the total sample set.