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Table 1 Primer sequences used for real-time PCR analysis

From: Matrix forming characteristics of inner and outer human meniscus cells on 3D collagen scaffolds under normal and low oxygen tensions

Gene

Primer Sequence

Direction

Reference

Aggrecan

5′AGGGCGAGTGGAATGATGTT3′

Forward

32

5′GGTGGCTGTGCCCTTTTTAC3′

Reverse

COL1A2

5′TTGCCCAAAGTTGTCCTCTTCT3′

Forward

32

5′AGCTTCTGTGGAACCATGGAA3′

Reverse

COL2A1

5′CTGCAAAATAAAATCTCGGTGTTCT3′

Forward

32

5′GGGCATTTGACTCACACCAGT3′

Reverse

COMP

5′GCGAAACGTGGGTTGGAA3′

Forward

36

5′GCCGGTGCTGCAGGAA3′

Reverse

HIF-1α

5′GTAGTTGTGGAAGTTTATGCTAATATTGTGT3′

Forward

34

5′CTTGTTTACAGTCTGCTCAAAATATCTT3′

Reverse

HIF-2α

5′GGTGGCAGAACTTGAAGGGTTA3′

Forward

35

5′GGGCAACACACACAGGAAATC3′

Reverse

Sox9

5′CTTTGGTTTGTGTTCGTGTTTTG3′

Forward

32

5′AGAGAAAGAAAAAGGGAAAGGTAAGTTT3′

Reverse

β-actin

5′AAGCCACCCCACTTCTCTCTAA3′

Forward

32

 

5′AATGCTATCACCTCCCCTGTGT3′

Reverse

 
  1. All primers were purchased from Invitrogen (Mississauga, Ontario, Canada). COL1A2, collagen type I α2 chain; COL2A1, collagen type II α1 chain; COMP, cartilage oligomeric matrix protein; HIF-1α, hypoxia-inducible factor 1α; HIF-2α, hypoxia-inducible factor 2α; Sox9, Sry-related HMG box 9.