Citation | Muscle segmentation: Manual/ automatic | Volume Full/partial | Software used | Equation |
---|---|---|---|---|
Ackland et al. 2019 [66] | Semi-automatic | Full (excl. fat) | Amira FEI (V 5.3.3, FEI Visualization Sciences Group) | Estimated from CSAs, multiplied by slice thickness, normalised to body weight |
Amabile et al. 2017 [104] | Manual | Full | Imaging software developed by researchers’ institution | “Volume” was normalized to subject height |
Belzunce et al., 2020 [52] | Automatic & Manual | Partial (excl. top & bottom extremes, & fat) | Simpleware ™ (V 2018.12, ScanIP) | Estimated from CSAs |
Belzunce et al., 2021 [91] | Automatic | Full | Simpleware ™ (V 2020.6, ScanIP) | Estimated from CSAs, normalised to body weight |
Cowan et al., 2019 [19] | Manual | Full | 3D-DOCTOR (Able Software Corp.) | Estimated from CSAs, multiplied by slice thickness |
Dorado 2020 et al., 2020 [51] | Manual | Full | Slice O’matic (V 4.3, Tomovision Inc) | Estimated from CSAs |
Flack et al., 2012 [73] | Semi- automatic | Full (excl. fat) | OsiriX package (V 2.7.5) | Estimated from CSAs, multiplied by slice thickness |
Franettovich Smith et al., 2017 [135] | Manual | Full | OsiriX package (V 5.7) | Estimated from CSAs, multiplied by slice thickness |
Grimaldi et al., 2009a [23] Grimaldi et al., 2009b [24] | Manual | Full | Osiris package (V 4.19) | Estimated from CSAs, multiplied by slice thickness |
Handsfield et al.,2014 [105] | Manual | Full | Software written in Matlab (The Math works Inc.) | Estimated from CSAs with normalised to body mass & height |
Homma et al., 2019 [107] | Manual | Full | ZedHip (Lexi Co., Ltd.) | Estimated from CSAs, multiplied by slice thickness |
Jaegers et al., 1992 [43] Jaegers et al., 1995[124] | Manual | Full | Obex (Cerebrum) | Estimated from CSAs |
Koch et al., 2021 [26] | Manual | Partial | ITK‐Snap Software (V 3.6) | Estimated from CSAs |
Kubo et al., 2019 [126] | Manual | Full | Osirix package (DICOM image analysis) | Estimated from CSAs, multiplied by slice thickness |
Loureiro et al., 2018 [76] | Semi-automatic | Full | Mimics | Estimated from CSAs |
Makridis et al., 2014 [127] | Manual | Full | NR | Estimated from CSAs, multiplied by slice thickness |
Marcon et al., 2016 [89] | Semi-automatic | Full (excl. artifacts) | Myrian 1 (Intrasense) | Estimated from CSAs |
Mastenbrook et al., 2017 [128] | Semi-automatic | Full | Analyze 11.0 (AnalyzeDirect, Inc.) | Estimated from CSAs |
Miller et al., 2020 [50] | Manual | Full | DICOM software (V 2.2.0, Horos) | Estimated from CSAs, multiplied by slice thickness, normalised to body mass |
Miokovic et al., 2011 [62] | Manual | Full | ImageJ (V 1.38x) | Estimated from CSAs |
Montefiori et al., 2020 [55] | Semi-automatic | Full | Mimics (V 20.0, Materialise) | Estimated from CSAs |
Reito et al., 2016 [131] | Manual | NR | NR | “Muscle atrophy was assessed as a decrease in volume and the appearance of fatty change relative to the contralateral, non-operated side.” |
Rothwell et al., 2019 [132] | Manual | Full | OsiriX Lite (V 8.0.1, Pixmeo) | Estimated from CSAs, multiplied by slice thickness, normalised to body mass & height |
Sakamaki et al., 2011 [133] | Manual | Full | NR | Estimated from CSAs, multiplied slice thickness |
Semciw et al., 2016 [63] | Manual | Full | Sante DICOM Editor (Santesoft) | Estimated from CSAs, multiplied slice thickness |
Skorupska et al., 2016 [65] | Manual | Full | ITK-SNAP (V 2.2.0) | Estimated from CSAs, multiplied by slice thickness |
Springer et al., 2012 [59] | Manual | Full | Vitrea 2 (V 4.1.2.0) | Estimated from CSAs |
Sugisaki et al., 2018 [106] | Manual | Full | OsiriX (V 2.4) | Estimated from CSAs, multiplied by slice thickness, normalised to body mass |
Tran et al., 2021 [121] | Manual | Full | The MathWorks, Inc., Natick, MA, United States | Estimated from CSAs, multiplied by slice thickness |
Winkler et al., 2018 [61] | Manual | Full | PACS workstation OsiriX | Estimated from CSAs |
Zacharias et al., 2016 [22] Zacharias et al., 2018 [21] | Manual | Full (excl. fat) | Sante DICOM editor | Estimated from CSAs, multiplied by slice thickness |