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Table 4 Result of TaqMan copy number assays

From: A genome-wide association study of copy-number variation identifies putative loci associated with osteoarthritis in Koreans

Chr

Start

End

Probe ID

CNV genotypea

TP

FP

PPVb

Chr1

112490851

112509390

Hs_03201731_cn

0, 1, 2

179

9

0.95

Chr8

9535412

9536779

Hs_04345744_cn

0, 1, 2

73

1

0.99

Chr9

71952096

71953157

Hs_06899364_cn

1, 2

58

1

0.98

Chr11

85981796

85983048

Hs_03777027_cn

0, 1, 2

70

4

0.95

Chr13

36971042

36976531

CCT956B

0, 1, 2

85

3

0.97

Chr17

47477132

47478158

CCD1TXG

0, 1, 2

86

0

1.00

  1. aDesignations for the CNV genotype are as indicated in the Methods. bPPV: positive predictive value, PPV is defined as number of TPs/(number of TPs + number of FPs).
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BMC Musculoskeletal Disorders

ISSN: 1471-2474

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