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Table 4 Genes differentially expressed in individual OA meniscal cells compared to normal meniscal cells.

From: Analysis of meniscal degeneration and meniscal gene expression

Gene
Name
Gene ID OA1 OA1 OA3 OA4 OA5 Description
BST1 NM_004334 3.9 3.4 3.3 1.6 2.2 bone marrow stromal cell antigen 1
FGF9 NM_002010 3.7 2.4 3.7 2.5 2.9 Fibroblast growth factor 9
ACAN NM_013227 2.4 1.6 1.6 0.0 1.6 Aggrecan
COL11A1 J04177 0.0 11.5 5.8 2.2 3.6 Collagen, type XI, alpha 1
ANKH AL833238 0.0 1.8 1.7 1.5 1.8 Ankylosis, progressive homolog (mouse)
MGP NM_000900 11.8 4.7 21.6 0.0 17.6 Matrix Gla protein
TUFT1 NM_020127 2.8 2.7 1.9 0.0 0.0 Tuftelin 1
TFIP11 NM_012143 2.2 1.6 0.0 0.0 0.0 Tuftelin interacting protein 11
IL20RB AL578102 2.3 2.7 0.0 2.6 7.8 Interleukin 20 receptor beta
IL26 NM_018402 1.7 1.6 1.6 0.0 3.0 Interleukin 26
COL4A5 AW052179 -3.1 -3.0 -3.1 -3.0 -3.1 Collagen, type IV, alpha 5 (Alport syndrome)
MMP9 NM_004994 -2.2 -2.1 -2.1 0.0 -2.2 Matrix metallopeptidase 9
MMP10 NM_002425 -2.7 -2.6 -2.7 -1.5 -2.6 Matrix metallopeptidase 10
MMP12 NM_002426 -2.1 -2.0 -2.1 0.0 -2.1 Matrix metallopeptidase 12
FZD10 NM_007197 -1.6 -1.5 -1.6 -1.5 -1.5 Frizzled homolog 10 (Drosophila)
CYTL1 NM_018659 -2.6 -2.6 -2.6 -2.6 -2.5 Cytokine-like 1
CHODL NM_024944 -2.6 -2.6 -2.6   -2.6 Chondrolectin
  1. *Positive number indicates elevated expression (fold) in OA meniscal cells compared to normal meniscal cells. Negative number indicates decreased expression (fold) in OA meniscal cells compared to normal meniscal cells. 0.0 indicates there was no differential gene expression being detected.